Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.23■□□□□ 0.19
UBE2E3Q969T4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 AL662844.1-201ENST00000546340 181 ntBASIC16.23■□□□□ 0.19
UBE2E3Q969T4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 AC005412.3-201ENST00000580309 715 ntBASIC16.23■□□□□ 0.19
UBE2E3Q969T4 MPDU1-223ENST00000582151 728 ntBASIC16.23■□□□□ 0.19
UBE2E3Q969T4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBE2E3Q969T4 RNF216P1-203ENST00000404404 2427 ntBASIC16.23■□□□□ 0.19
UBE2E3Q969T4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 MRPL20P1-201ENST00000400819 433 ntBASIC16.22■□□□□ 0.19
UBE2E3Q969T4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 AL031284.1-201ENST00000419297 478 ntBASIC16.22■□□□□ 0.19
UBE2E3Q969T4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.22■□□□□ 0.19
UBE2E3Q969T4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 AP001350.2-201ENST00000625104 1094 ntBASIC16.22■□□□□ 0.19
UBE2E3Q969T4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 AL353732.1-201ENST00000569618 1459 ntBASIC16.22■□□□□ 0.19
UBE2E3Q969T4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2E3Q969T4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 FLJ38576-201ENST00000623820 2459 ntBASIC16.21■□□□□ 0.19
UBE2E3Q969T4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 AC104692.2-201ENST00000603054 253 ntBASIC16.21■□□□□ 0.19
UBE2E3Q969T4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2E3Q969T4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
UBE2E3Q969T4 AC006538.1-201ENST00000567905 1585 ntBASIC16.21■□□□□ 0.18
UBE2E3Q969T4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
UBE2E3Q969T4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.21■□□□□ 0.18
UBE2E3Q969T4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2E3Q969T4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms