Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6V0A1Q93050 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 AC005237.2-201ENST00000434368 219 ntBASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 AC092068.3-201ENST00000587894 2016 ntBASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6V0A1Q93050 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TFAMP1-201ENST00000412727 736 ntBASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 AL592309.1-201ENST00000443127 649 ntBASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 AC009093.7-201ENST00000623853 1223 ntBASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6V0A1Q93050 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 RN7SL589P-201ENST00000481268 310 ntBASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 AC079140.1-201ENST00000508039 487 ntBASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 SPCS2P1-201ENST00000561636 679 ntBASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 MIR4492-201ENST00000581627 80 ntBASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms