Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
USP13Q92995 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.66■□□□□ 0.42
USP13Q92995 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.66■□□□□ 0.42
USP13Q92995 AC140658.5-201ENST00000438532 169 ntBASIC17.66■□□□□ 0.42
USP13Q92995 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
USP13Q92995 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.66■□□□□ 0.42
USP13Q92995 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.66■□□□□ 0.42
USP13Q92995 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.66■□□□□ 0.42
USP13Q92995 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.66■□□□□ 0.42
USP13Q92995 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
USP13Q92995 AC106028.4-201ENST00000614509 607 ntBASIC17.66■□□□□ 0.42
USP13Q92995 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.66■□□□□ 0.42
USP13Q92995 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.66■□□□□ 0.42
USP13Q92995 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.66■□□□□ 0.42
USP13Q92995 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.66■□□□□ 0.42
USP13Q92995 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP13Q92995 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.65■□□□□ 0.42
USP13Q92995 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.65■□□□□ 0.42
USP13Q92995 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.65■□□□□ 0.42
USP13Q92995 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.65■□□□□ 0.42
USP13Q92995 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.65■□□□□ 0.42
USP13Q92995 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 AC099522.2-201ENST00000607001 744 ntBASIC17.65■□□□□ 0.42
USP13Q92995 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.65■□□□□ 0.42
USP13Q92995 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP13Q92995 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP13Q92995 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP13Q92995 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
USP13Q92995 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP13Q92995 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP13Q92995 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.64■□□□□ 0.42
USP13Q92995 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.64■□□□□ 0.42
USP13Q92995 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP13Q92995 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 AL355306.1-201ENST00000415580 579 ntBASIC17.64■□□□□ 0.41
USP13Q92995 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.64■□□□□ 0.41
USP13Q92995 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.64■□□□□ 0.41
USP13Q92995 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.64■□□□□ 0.41
USP13Q92995 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 MIR4515-201ENST00000584082 81 ntBASIC17.64■□□□□ 0.41
USP13Q92995 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.64■□□□□ 0.41
USP13Q92995 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.64■□□□□ 0.41
USP13Q92995 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP13Q92995 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.64■□□□□ 0.41
USP13Q92995 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms