Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 AC079328.2-201ENST00000561241 3354 ntBASIC18.1■□□□□ 0.49
SEMA4DQ92854 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 AC007967.2-201ENST00000432613 625 ntBASIC18.1■□□□□ 0.49
SEMA4DQ92854 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 AL139011.1-202ENST00000642063 584 ntBASIC18.1■□□□□ 0.49
SEMA4DQ92854 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.1■□□□□ 0.49
SEMA4DQ92854 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEMA4DQ92854 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 ALOX12P2-203ENST00000570921 1945 ntBASIC18.09■□□□□ 0.49
SEMA4DQ92854 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SEMA4DQ92854 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEMA4DQ92854 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEMA4DQ92854 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.08■□□□□ 0.49
SEMA4DQ92854 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.08■□□□□ 0.49
SEMA4DQ92854 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SEMA4DQ92854 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.08■□□□□ 0.49
SEMA4DQ92854 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEMA4DQ92854 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SEMA4DQ92854 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEMA4DQ92854 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 RHOQP3-201ENST00000437982 621 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 AC087641.1-201ENST00000557561 1021 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 AC106730.1-201ENST00000566722 1090 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 AC018845.2-201ENST00000568326 409 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 AC064836.3-201ENST00000607928 673 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.08■□□□□ 0.48
SEMA4DQ92854 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms