Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 NAPSB-206ENST00000562112 1266 ntBASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AC125634.1-201ENST00000438758 1403 ntBASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 MIR662-201ENST00000384847 95 ntBASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 ZNF444P1-201ENST00000559497 298 ntBASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKAP2Q8WWK9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 AL021920.2-201ENST00000624828 1351 ntBASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 FAM8A6P-201ENST00000407496 1135 ntBASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 AL355075.4-201ENST00000554988 638 ntBASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
CKAP2Q8WWK9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms