Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 AC096734.2-201ENST00000562054 433 ntBASIC17.85■□□□□ 0.45
UBA3Q8TBC4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA3Q8TBC4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AL603756.1-201ENST00000606511 2163 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AC131009.4-201ENST00000624048 1740 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AL353732.1-201ENST00000569618 1459 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 RNA5SP416-201ENST00000516838 111 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 FAM197Y3-203ENST00000618346 717 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AC004877.2-201ENST00000623941 599 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 AC092171.3-201ENST00000610122 2651 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 UBALD1-205ENST00000590891 2641 ntBASIC17.84■□□□□ 0.45
UBA3Q8TBC4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA3Q8TBC4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 AC006277.1-201ENST00000624348 1610 ntBASIC17.83■□□□□ 0.45
UBA3Q8TBC4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBA3Q8TBC4 AC079328.2-201ENST00000561241 3354 ntBASIC17.83■□□□□ 0.45
UBA3Q8TBC4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 RHOQP3-201ENST00000437982 621 ntBASIC17.83■□□□□ 0.44
UBA3Q8TBC4 AL591424.1-201ENST00000442569 1213 ntBASIC17.83■□□□□ 0.44
UBA3Q8TBC4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 KRT18P58-201ENST00000527480 1120 ntBASIC17.83■□□□□ 0.44
UBA3Q8TBC4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.83■□□□□ 0.44
UBA3Q8TBC4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms