Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 AC073592.4-201ENST00000623827 446 ntBASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 AC046158.3-201ENST00000624947 2558 ntBASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLHC1Q8NHS4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 AP005117.1-201ENST00000584346 1413 ntBASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.23■□□□□ 0.19
CLHC1Q8NHS4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms