Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AC027682.1-201ENST00000562846 899 ntBASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SRR-208ENST00000576848 588 ntTSL 4 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TPRG1LP1-201ENST00000598702 760 ntBASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AL512631.2-201ENST00000604634 923 ntBASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 RASSF1-AS1-201ENST00000629828 790 ntBASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AC009090.5-201ENST00000624886 2285 ntBASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AC005089.1-201ENST00000619486 2241 ntBASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 KRT8P45-201ENST00000414328 1447 ntBASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms