Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 HLA-A-201ENST00000376802 1334 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 PCDHB17P-201ENST00000539533 2393 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 AC046158.3-201ENST00000624947 2558 ntBASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 AC108073.2-201ENST00000464002 357 ntBASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 AC005412.3-201ENST00000580309 715 ntBASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 AC013467.2-201ENST00000605472 835 ntBASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 REXO1L3P-201ENST00000622202 1288 ntBASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.11■□□□□ 0.17
SRFBP1Q8NEF9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 AC108751.1-201ENST00000490852 363 ntBASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 SLC25A6P2-201ENST00000497974 877 ntBASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 AL049840.3-201ENST00000602669 611 ntBASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 AP001350.2-201ENST00000625104 1094 ntBASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRFBP1Q8NEF9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms