Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.2■□□□□ 0.34
KDM1BQ8NB78 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.2■□□□□ 0.34
KDM1BQ8NB78 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
KDM1BQ8NB78 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDM1BQ8NB78 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.2■□□□□ 0.34
KDM1BQ8NB78 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.19■□□□□ 0.34
KDM1BQ8NB78 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 FAM86C2P-203ENST00000528684 1004 ntBASIC17.19■□□□□ 0.34
KDM1BQ8NB78 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.19■□□□□ 0.34
KDM1BQ8NB78 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 DUX4L17-201ENST00000557360 1267 ntBASIC17.18■□□□□ 0.34
KDM1BQ8NB78 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 AL513210.1-201ENST00000629608 234 ntBASIC17.18■□□□□ 0.34
KDM1BQ8NB78 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDM1BQ8NB78 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 AC012569.1-201ENST00000591191 1524 ntBASIC17.17■□□□□ 0.34
KDM1BQ8NB78 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.17■□□□□ 0.34
KDM1BQ8NB78 AC124947.2-201ENST00000547118 1133 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms