Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC092919.2-201ENST00000623631 1645 ntBASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 PMS2P4-201ENST00000412466 1052 ntBASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AC112191.1-201ENST00000523689 701 ntBASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AL009183.1-201ENST00000603760 355 ntBASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AC023511.2-201ENST00000618803 211 ntBASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAM1L1Q8N609 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 AC078925.2-201ENST00000624013 1973 ntBASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 AC002056.1-201ENST00000395613 760 ntBASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 MKNK2P1-201ENST00000437526 628 ntBASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 HLA-J-202ENST00000469281 1241 ntBASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAM1L1Q8N609 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AL603756.1-201ENST00000606511 2163 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms