Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC129492.6-201ENST00000611383 1305 ntBASIC18.3■□□□□ 0.52
VPS52Q8N1B4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 HLA-J-203ENST00000494367 1087 ntBASIC18.3■□□□□ 0.52
VPS52Q8N1B4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 AC093512.1-201ENST00000617969 520 ntBASIC18.3■□□□□ 0.52
VPS52Q8N1B4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 AC124067.4-201ENST00000519691 2379 ntBASIC18.3■□□□□ 0.52
VPS52Q8N1B4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 AC023141.5-201ENST00000458585 616 ntBASIC18.29■□□□□ 0.52
VPS52Q8N1B4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 AC025678.2-201ENST00000562061 970 ntBASIC18.29■□□□□ 0.52
VPS52Q8N1B4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.29■□□□□ 0.52
VPS52Q8N1B4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.29■□□□□ 0.52
VPS52Q8N1B4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 AC133963.1-201ENST00000504166 1679 ntBASIC18.28■□□□□ 0.52
VPS52Q8N1B4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 AC002056.1-201ENST00000395613 760 ntBASIC18.28■□□□□ 0.52
VPS52Q8N1B4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 AC109322.1-201ENST00000524499 1264 ntBASIC18.28■□□□□ 0.52
VPS52Q8N1B4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VPS52Q8N1B4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 PP12613-201ENST00000424958 2230 ntBASIC18.27■□□□□ 0.52
VPS52Q8N1B4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms