Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC099336.1-201ENST00000417053 1171 ntBASIC23.53■■□□□ 1.36
UBR1Q8IWV7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC23.53■■□□□ 1.36
UBR1Q8IWV7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 GPR182-203ENST00000622922 591 ntBASIC23.52■■□□□ 1.36
UBR1Q8IWV7 AC068587.10-201ENST00000641210 219 ntBASIC23.52■■□□□ 1.36
UBR1Q8IWV7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBR1Q8IWV7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 TUBB1P2-201ENST00000422712 1306 ntBASIC23.51■■□□□ 1.35
UBR1Q8IWV7 TUBB1P1-201ENST00000503144 1300 ntBASIC23.51■■□□□ 1.35
UBR1Q8IWV7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.51■■□□□ 1.35
UBR1Q8IWV7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC006277.1-201ENST00000624348 1610 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AL583810.1-201ENST00000553344 1045 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC233724.13-201ENST00000598383 410 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 MIR6869-201ENST00000619434 62 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 CDC14C-201ENST00000428251 1719 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 KRT8P39-201ENST00000396270 1433 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 ACTBP11-201ENST00000436287 1126 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC026979.3-201ENST00000607315 403 ntBASIC23.5■■□□□ 1.35
UBR1Q8IWV7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UBR1Q8IWV7 AC104581.1-202ENST00000635932 2618 ntBASIC23.49■■□□□ 1.35
UBR1Q8IWV7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
UBR1Q8IWV7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms