Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 TSPY19P-201ENST00000418461 509 ntBASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 TSPY18P-201ENST00000441642 509 ntBASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 AP002490.2-201ENST00000524791 560 ntBASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 FGFR3P6-201ENST00000457012 610 ntBASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 AL355877.3-201ENST00000622820 899 ntBASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00346Q8IVM7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00346Q8IVM7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00346Q8IVM7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00346Q8IVM7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00346Q8IVM7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00346Q8IVM7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 MTDHP4-201ENST00000600287 670 ntBASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 AL139424.1-201ENST00000607572 797 ntBASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms