Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRLF3Q8IUI8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 TPSP2-201ENST00000561760 610 ntBASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 FRMD8P1-201ENST00000440433 1524 ntBASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CRLF3Q8IUI8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 HYMAI-201ENST00000635591 3347 ntBASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 LINC00265-3P-201ENST00000447588 903 ntBASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 PRELID1P1-202ENST00000567272 903 ntBASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 AC090616.6-201ENST00000582640 721 ntBASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 AL121894.2-201ENST00000602977 491 ntBASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 IGHV3-41-201ENST00000613121 348 ntBASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CRLF3Q8IUI8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CRLF3Q8IUI8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
CRLF3Q8IUI8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms