Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 AF238378.1-201ENST00000526806 358 ntBASIC17.56■□□□□ 0.4
RFX6Q8HWS3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 IFNL4P1-201ENST00000607083 540 ntBASIC17.56■□□□□ 0.4
RFX6Q8HWS3 AC004706.3-202ENST00000621574 984 ntBASIC17.56■□□□□ 0.4
RFX6Q8HWS3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFX6Q8HWS3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.55■□□□□ 0.4
RFX6Q8HWS3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 AC021087.4-201ENST00000563761 564 ntBASIC17.55■□□□□ 0.4
RFX6Q8HWS3 AC025062.2-201ENST00000605477 670 ntBASIC17.55■□□□□ 0.4
RFX6Q8HWS3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms