Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PACS2Q86VP3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
PACS2Q86VP3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PACS2Q86VP3 AC106881.1-201ENST00000605849 3329 ntBASIC17.04■□□□□ 0.32
PACS2Q86VP3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 CICP24-201ENST00000605464 2705 ntBASIC17.04■□□□□ 0.32
PACS2Q86VP3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PACS2Q86VP3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC005840.4-201ENST00000541242 2494 ntBASIC17.04■□□□□ 0.32
PACS2Q86VP3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC092053.1-201ENST00000605787 1936 ntBASIC17.04■□□□□ 0.32
PACS2Q86VP3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PACS2Q86VP3 AC034236.2-201ENST00000606662 1610 ntBASIC17.03■□□□□ 0.32
PACS2Q86VP3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ARMC10P1-201ENST00000313754 855 ntBASIC17.03■□□□□ 0.32
PACS2Q86VP3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 AC034232.1-201ENST00000506026 1064 ntBASIC17.03■□□□□ 0.32
PACS2Q86VP3 KRT18P41-201ENST00000518924 1277 ntBASIC17.03■□□□□ 0.32
PACS2Q86VP3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 GCSHP2-201ENST00000560971 527 ntBASIC17.03■□□□□ 0.32
PACS2Q86VP3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 PPT1-215ENST00000641471 2368 ntBASIC17.03■□□□□ 0.32
PACS2Q86VP3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PACS2Q86VP3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PACS2Q86VP3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PACS2Q86VP3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.02■□□□□ 0.32
PACS2Q86VP3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms