Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 PHGDH-209ENST00000641074 1780 ntBASIC11.24□□□□□ -0.61
SCXQ7RTU7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 NKAPP1-205ENST00000585790 367 ntBASIC11.24□□□□□ -0.61
SCXQ7RTU7 MTDHP4-201ENST00000600287 670 ntBASIC11.24□□□□□ -0.61
SCXQ7RTU7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 PMS2P7-201ENST00000506558 1336 ntBASIC11.24□□□□□ -0.61
SCXQ7RTU7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCXQ7RTU7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.24□□□□□ -0.61
SCXQ7RTU7 AC093010.1-201ENST00000473625 1624 ntBASIC11.24□□□□□ -0.61
SCXQ7RTU7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.23□□□□□ -0.61
SCXQ7RTU7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms