Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 SPDYE14P-201ENST00000442619 822 ntBASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CNN2P2-201ENST00000443536 909 ntBASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CNN2P3-201ENST00000450201 906 ntBASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 IGHV3-62-201ENST00000520057 340 ntBASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 AC026150.2-201ENST00000564693 1156 ntBASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 AL136317.3-201ENST00000618497 906 ntBASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC62Q6P9F0 LINC00896-202ENST00000609602 2128 ntBASIC18.89■□□□□ 0.62
CCDC62Q6P9F0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC62Q6P9F0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC62Q6P9F0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AC008267.7-201ENST00000624570 1194 ntBASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AP001350.2-201ENST00000625104 1094 ntBASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 AL021920.2-201ENST00000624828 1351 ntBASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 UXT-AS1-201ENST00000590504 1525 ntBASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC62Q6P9F0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 SLC25A39P2-201ENST00000537614 270 ntBASIC18.88■□□□□ 0.61
CCDC62Q6P9F0 AP000842.3-202ENST00000569238 1080 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms