Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NFIC-211ENST00000641145 8399 ntBASIC19.14■□□□□ 0.66
PPP4R3AQ6IN85 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPP4R3AQ6IN85 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPP4R3AQ6IN85 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 HCG4-201ENST00000418983 998 ntBASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 RNA5SP416-201ENST00000516838 111 ntBASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R3AQ6IN85 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 MIR4515-201ENST00000584082 81 ntBASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R3AQ6IN85 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 AD000864.1-201ENST00000624076 2295 ntBASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 AL391256.1-201ENST00000443260 1855 ntBASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 AL645728.2-201ENST00000641974 660 ntBASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R3AQ6IN85 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms