Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 NEFHP1-201ENST00000412845 2629 ntBASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 AL512384.1-201ENST00000406683 331 ntBASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 FTH1-202ENST00000526640 786 ntTSL 2 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC25.1■■□□□ 1.61
CDC42BPAQ5VT25 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC099568.2-201ENST00000609194 695 ntBASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC098850.1-201ENST00000419919 790 ntBASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 SNX29P1-201ENST00000548357 1007 ntBASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AL109936.8-201ENST00000641772 604 ntBASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 AC067852.2-201ENST00000590513 2313 ntBASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPAQ5VT25 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 AC007541.1-201ENST00000570282 1469 ntBASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 AL031731.1-201ENST00000642131 2094 ntBASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 SRD5A3P1-201ENST00000603021 949 ntBASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPAQ5VT25 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPAQ5VT25 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPAQ5VT25 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPAQ5VT25 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPAQ5VT25 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPAQ5VT25 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPAQ5VT25 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 CD276-203ENST00000537340 2439 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 AC017083.2-201ENST00000608069 979 ntBASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 PP12613-201ENST00000424958 2230 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms