Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-BQ31612 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-BQ31612 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HLA-BQ31612 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-BQ31612 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-BQ31612 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.24■□□□□ 0.19
HLA-BQ31612 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-BQ31612 AL132655.2-201ENST00000596276 594 ntBASIC16.24■□□□□ 0.19
HLA-BQ31612 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-BQ31612 RN7SL828P-201ENST00000607615 303 ntBASIC16.24■□□□□ 0.19
HLA-BQ31612 AL844908.2-201ENST00000609461 460 ntBASIC16.24■□□□□ 0.19
HLA-BQ31612 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-BQ31612 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-BQ31612 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-BQ31612 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 FAM220BP-201ENST00000377689 816 ntBASIC16.23■□□□□ 0.19
HLA-BQ31612 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-BQ31612 AL353779.1-201ENST00000434793 351 ntBASIC16.23■□□□□ 0.19
HLA-BQ31612 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HLA-BQ31612 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-BQ31612 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-BQ31612 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 AC116353.5-201ENST00000638148 1699 ntBASIC16.23■□□□□ 0.19
HLA-BQ31612 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-BQ31612 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-BQ31612 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-BQ31612 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-BQ31612 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-BQ31612 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-BQ31612 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-BQ31612 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-BQ31612 AC135050.7-201ENST00000624508 2218 ntBASIC16.22■□□□□ 0.19
HLA-BQ31612 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-BQ31612 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-BQ31612 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-BQ31612 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-BQ31612 ATP5G2P4-201ENST00000442175 420 ntBASIC16.22■□□□□ 0.19
HLA-BQ31612 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-BQ31612 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 AC073439.1-201ENST00000624121 1774 ntBASIC16.22■□□□□ 0.19
HLA-BQ31612 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-BQ31612 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-BQ31612 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 AC108860.2-201ENST00000562760 2183 ntBASIC16.21■□□□□ 0.19
HLA-BQ31612 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms