Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
COL16A1Q07092 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
COL16A1Q07092 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.29■■□□□ 1.16
COL16A1Q07092 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.29■■□□□ 1.16
COL16A1Q07092 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC22.29■■□□□ 1.16
COL16A1Q07092 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 NEU3-202ENST00000526068 431 ntTSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 U62317.3-201ENST00000608319 855 ntBASIC22.29■■□□□ 1.16
COL16A1Q07092 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 KRT8P22-201ENST00000562317 1415 ntBASIC22.29■■□□□ 1.16
COL16A1Q07092 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL16A1Q07092 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
COL16A1Q07092 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.29■■□□□ 1.16
COL16A1Q07092 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC22.28■■□□□ 1.16
COL16A1Q07092 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC22.28■■□□□ 1.16
COL16A1Q07092 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL16A1Q07092 AC253536.4-201ENST00000440539 267 ntBASIC22.28■■□□□ 1.16
COL16A1Q07092 LDHBP1-201ENST00000455730 1119 ntBASIC22.28■■□□□ 1.16
COL16A1Q07092 PTK7-212ENST00000476760 902 ntTSL 2 BASIC22.28■■□□□ 1.16
COL16A1Q07092 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC22.28■■□□□ 1.16
COL16A1Q07092 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC22.28■■□□□ 1.16
COL16A1Q07092 MIR4706-201ENST00000582134 82 ntBASIC22.28■■□□□ 1.16
COL16A1Q07092 AC024267.1-201ENST00000582320 895 ntBASIC22.28■■□□□ 1.16
COL16A1Q07092 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC22.28■■□□□ 1.16
COL16A1Q07092 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
COL16A1Q07092 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.27■■□□□ 1.16
COL16A1Q07092 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 AMT-232ENST00000636199 1546 ntTSL 5 BASIC22.27■■□□□ 1.16
COL16A1Q07092 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.27■■□□□ 1.16
COL16A1Q07092 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.27■■□□□ 1.16
COL16A1Q07092 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 DEK-201ENST00000244776 1441 ntTSL 2 BASIC22.27■■□□□ 1.16
COL16A1Q07092 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 APOA1-205ENST00000375329 927 ntTSL 2 BASIC22.27■■□□□ 1.16
COL16A1Q07092 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL16A1Q07092 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 BTBD6P1-201ENST00000412176 1267 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 AC026954.1-201ENST00000429771 1293 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COL16A1Q07092 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC22.27■■□□□ 1.16
COL16A1Q07092 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC22.27■■□□□ 1.16
COL16A1Q07092 AP001889.1-201ENST00000525414 633 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 AC124283.3-201ENST00000570869 594 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 GNRHR2-203ENST00000581100 1187 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 RPS15-212ENST00000593052 629 ntTSL 2 BASIC22.27■■□□□ 1.16
COL16A1Q07092 BRI3BPP1-201ENST00000594224 787 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 AC244669.2-201ENST00000612320 853 ntBASIC22.27■■□□□ 1.16
COL16A1Q07092 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL16A1Q07092 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
COL16A1Q07092 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC22.26■■□□□ 1.15
COL16A1Q07092 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.26■■□□□ 1.15
COL16A1Q07092 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL16A1Q07092 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL16A1Q07092 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL16A1Q07092 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL16A1Q07092 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC22.26■■□□□ 1.15
COL16A1Q07092 HNRNPA1P13-201ENST00000510646 963 ntBASIC22.26■■□□□ 1.15
COL16A1Q07092 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL16A1Q07092 SUOX-214ENST00000551841 906 ntTSL 3 BASIC22.26■■□□□ 1.15
COL16A1Q07092 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC22.26■■□□□ 1.15
COL16A1Q07092 AC036164.1-201ENST00000570544 333 ntBASIC22.26■■□□□ 1.15
COL16A1Q07092 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC22.26■■□□□ 1.15
COL16A1Q07092 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC22.26■■□□□ 1.15
COL16A1Q07092 KC6-205ENST00000599934 556 ntTSL 4 BASIC22.26■■□□□ 1.15
COL16A1Q07092 AC026979.3-201ENST00000607315 403 ntBASIC22.26■■□□□ 1.15
COL16A1Q07092 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms