Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IRX4P78413 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
IRX4P78413 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
IRX4P78413 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
IRX4P78413 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 MCCD1P2-201ENST00000423228 335 ntBASIC17.6■□□□□ 0.41
IRX4P78413 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.6■□□□□ 0.41
IRX4P78413 CYMP-203ENST00000474680 1263 ntBASIC17.6■□□□□ 0.41
IRX4P78413 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.6■□□□□ 0.41
IRX4P78413 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 RFPL4AP1-201ENST00000530883 850 ntBASIC17.6■□□□□ 0.41
IRX4P78413 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
IRX4P78413 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.6■□□□□ 0.41
IRX4P78413 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.6■□□□□ 0.41
IRX4P78413 AL022326.1-202ENST00000641533 845 ntBASIC17.6■□□□□ 0.41
IRX4P78413 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 KRT8P47-201ENST00000604727 1398 ntBASIC17.6■□□□□ 0.41
IRX4P78413 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.6■□□□□ 0.41
IRX4P78413 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX4P78413 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
IRX4P78413 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IRX4P78413 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 AL139384.1-201ENST00000612143 3047 ntBASIC17.6■□□□□ 0.41
IRX4P78413 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX4P78413 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX4P78413 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX4P78413 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX4P78413 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
IRX4P78413 AC004817.3-201ENST00000602957 2129 ntBASIC17.59■□□□□ 0.41
IRX4P78413 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX4P78413 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
IRX4P78413 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
IRX4P78413 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
IRX4P78413 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.59■□□□□ 0.41
IRX4P78413 KRT18P27-201ENST00000427733 1299 ntBASIC17.59■□□□□ 0.41
IRX4P78413 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
IRX4P78413 AC108751.1-201ENST00000490852 363 ntBASIC17.59■□□□□ 0.41
IRX4P78413 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX4P78413 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX4P78413 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.59■□□□□ 0.41
IRX4P78413 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
IRX4P78413 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.59■□□□□ 0.41
IRX4P78413 LINC01451-201ENST00000623792 534 ntBASIC17.59■□□□□ 0.41
IRX4P78413 PGM5P2-202ENST00000637225 1043 ntBASIC17.59■□□□□ 0.41
IRX4P78413 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
IRX4P78413 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
IRX4P78413 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX4P78413 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
IRX4P78413 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms