Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.94■□□□□ 0.3
AP1S1P61966 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.94■□□□□ 0.3
AP1S1P61966 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP1S1P61966 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP1S1P61966 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.94■□□□□ 0.3
AP1S1P61966 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 AC109635.5-201ENST00000533593 962 ntBASIC16.94■□□□□ 0.3
AP1S1P61966 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 AL031055.1-201ENST00000606362 631 ntBASIC16.94■□□□□ 0.3
AP1S1P61966 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP1S1P61966 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
AP1S1P61966 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.93■□□□□ 0.3
AP1S1P61966 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.93■□□□□ 0.3
AP1S1P61966 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.93■□□□□ 0.3
AP1S1P61966 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 PMS2P4-201ENST00000412466 1052 ntBASIC16.93■□□□□ 0.3
AP1S1P61966 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP1S1P61966 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.93■□□□□ 0.3
AP1S1P61966 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.93■□□□□ 0.3
AP1S1P61966 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.93■□□□□ 0.3
AP1S1P61966 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 AP002472.1-201ENST00000577490 586 ntBASIC16.93■□□□□ 0.3
AP1S1P61966 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP1S1P61966 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
AP1S1P61966 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S1P61966 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
AP1S1P61966 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
AP1S1P61966 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AP1S1P61966 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.92■□□□□ 0.3
AP1S1P61966 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AP1S1P61966 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
AP1S1P61966 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 AC002056.1-201ENST00000395613 760 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.92■□□□□ 0.3
AP1S1P61966 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.92■□□□□ 0.3
AP1S1P61966 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
AP1S1P61966 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.92■□□□□ 0.3
AP1S1P61966 HLA-J-202ENST00000469281 1241 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.92■□□□□ 0.3
AP1S1P61966 AC112191.1-201ENST00000523689 701 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.92■□□□□ 0.3
AP1S1P61966 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 C20orf181-201ENST00000623918 480 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.92■□□□□ 0.3
AP1S1P61966 KRT8P39-201ENST00000396270 1433 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S1P61966 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.92■□□□□ 0.3
AP1S1P61966 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.92■□□□□ 0.3
AP1S1P61966 AC092919.2-201ENST00000623631 1645 ntBASIC16.92■□□□□ 0.3
AP1S1P61966 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms