Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
VSX2P58304 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.15■□□□□ 0.18
VSX2P58304 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.15■□□□□ 0.18
VSX2P58304 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.15■□□□□ 0.18
VSX2P58304 PDPK2P-202ENST00000562415 1191 ntBASIC16.15■□□□□ 0.18
VSX2P58304 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 AC010327.4-202ENST00000591484 748 ntBASIC16.15■□□□□ 0.18
VSX2P58304 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.15■□□□□ 0.18
VSX2P58304 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.15■□□□□ 0.18
VSX2P58304 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.15■□□□□ 0.18
VSX2P58304 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.15■□□□□ 0.18
VSX2P58304 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VSX2P58304 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.14■□□□□ 0.18
VSX2P58304 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VSX2P58304 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
VSX2P58304 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.14■□□□□ 0.18
VSX2P58304 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.14■□□□□ 0.18
VSX2P58304 TOP3BP1-201ENST00000420768 1380 ntBASIC16.14■□□□□ 0.17
VSX2P58304 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VSX2P58304 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
VSX2P58304 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.14■□□□□ 0.17
VSX2P58304 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.14■□□□□ 0.17
VSX2P58304 DNAJB3-201ENST00000446806 729 ntBASIC16.14■□□□□ 0.17
VSX2P58304 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.14■□□□□ 0.17
VSX2P58304 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.14■□□□□ 0.17
VSX2P58304 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 AC005412.3-201ENST00000580309 715 ntBASIC16.14■□□□□ 0.17
VSX2P58304 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.14■□□□□ 0.17
VSX2P58304 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.14■□□□□ 0.17
VSX2P58304 MTDHP5-201ENST00000598980 586 ntBASIC16.14■□□□□ 0.17
VSX2P58304 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
VSX2P58304 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.14■□□□□ 0.17
VSX2P58304 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 AC060834.1-201ENST00000443027 2032 ntBASIC16.14■□□□□ 0.17
VSX2P58304 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
VSX2P58304 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VSX2P58304 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 AP001094.4-201ENST00000579008 2176 ntBASIC16.13■□□□□ 0.17
VSX2P58304 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 KRT8P49-201ENST00000604166 1432 ntBASIC16.13■□□□□ 0.17
VSX2P58304 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.13■□□□□ 0.17
VSX2P58304 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.13■□□□□ 0.17
VSX2P58304 AC074386.1-202ENST00000463561 864 ntBASIC16.13■□□□□ 0.17
VSX2P58304 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.13■□□□□ 0.17
VSX2P58304 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.13■□□□□ 0.17
VSX2P58304 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.13■□□□□ 0.17
VSX2P58304 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.13■□□□□ 0.17
VSX2P58304 MIR3687-2-201ENST00000577708 61 ntBASIC16.13■□□□□ 0.17
VSX2P58304 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.13■□□□□ 0.17
VSX2P58304 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.13■□□□□ 0.17
VSX2P58304 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 MIR3687-1-201ENST00000614492 61 ntBASIC16.13■□□□□ 0.17
VSX2P58304 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.13■□□□□ 0.17
VSX2P58304 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VSX2P58304 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.13■□□□□ 0.17
VSX2P58304 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VSX2P58304 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms