Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 AL513477.1-201ENST00000602865 2407 ntBASIC14.73□□□□□ -0.05
CLDN12P56749 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 AC023824.1-201ENST00000562945 2975 ntBASIC14.73□□□□□ -0.05
CLDN12P56749 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN12P56749 ME2P1-201ENST00000426028 1970 ntBASIC14.73□□□□□ -0.05
CLDN12P56749 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN12P56749 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 NORAD-201ENST00000565493 5339 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 TUBB8P12-201ENST00000308911 1335 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 TUBB7P-202ENST00000428444 1305 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 TUBB8P7-204ENST00000567960 1332 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.72□□□□□ -0.05
CLDN12P56749 AC103564.2-201ENST00000432853 1299 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 AC139887.4-201ENST00000607877 719 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 AC063926.3-201ENST00000624734 5658 ntBASIC14.72□□□□□ -0.05
CLDN12P56749 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN12P56749 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN12P56749 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CLDN12P56749 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLDN12P56749 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLDN12P56749 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CLDN12P56749 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN12P56749 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLDN12P56749 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN12P56749 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN12P56749 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN12P56749 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN12P56749 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLDN12P56749 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLDN12P56749 KRT18P38-201ENST00000449496 1282 ntBASIC14.71□□□□□ -0.05
CLDN12P56749 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 YBX1P2-201ENST00000489612 999 ntBASIC14.71□□□□□ -0.05
CLDN12P56749 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN12P56749 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN12P56749 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms