Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.3■□□□□ 0.36
ATXN3P54252 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 HCG4B-203ENST00000450128 991 ntBASIC17.3■□□□□ 0.36
ATXN3P54252 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.3■□□□□ 0.36
ATXN3P54252 IGHV3-65-201ENST00000523210 341 ntBASIC17.3■□□□□ 0.36
ATXN3P54252 AC004790.2-201ENST00000623588 572 ntBASIC17.3■□□□□ 0.36
ATXN3P54252 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.3■□□□□ 0.36
ATXN3P54252 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
ATXN3P54252 AL118508.1-201ENST00000613502 2345 ntBASIC17.29■□□□□ 0.36
ATXN3P54252 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
ATXN3P54252 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.29■□□□□ 0.36
ATXN3P54252 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.29■□□□□ 0.36
ATXN3P54252 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.29■□□□□ 0.36
ATXN3P54252 SIGLEC30P-201ENST00000455569 941 ntBASIC17.29■□□□□ 0.36
ATXN3P54252 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.29■□□□□ 0.36
ATXN3P54252 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.29■□□□□ 0.36
ATXN3P54252 AC004449.1-201ENST00000564240 433 ntBASIC17.29■□□□□ 0.36
ATXN3P54252 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATXN3P54252 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.29■□□□□ 0.36
ATXN3P54252 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.29■□□□□ 0.36
ATXN3P54252 AC008667.4-201ENST00000607370 168 ntBASIC17.29■□□□□ 0.36
ATXN3P54252 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.29■□□□□ 0.36
ATXN3P54252 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.29■□□□□ 0.36
ATXN3P54252 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.29■□□□□ 0.36
ATXN3P54252 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATXN3P54252 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
ATXN3P54252 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATXN3P54252 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ATXN3P54252 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
ATXN3P54252 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ATXN3P54252 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 MRPL20P1-201ENST00000400819 433 ntBASIC17.28■□□□□ 0.36
ATXN3P54252 KLF4P1-201ENST00000412782 1185 ntBASIC17.28■□□□□ 0.36
ATXN3P54252 AC244107.1-201ENST00000442033 332 ntBASIC17.28■□□□□ 0.36
ATXN3P54252 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.28■□□□□ 0.36
ATXN3P54252 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.28■□□□□ 0.36
ATXN3P54252 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.28■□□□□ 0.36
ATXN3P54252 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.28■□□□□ 0.36
ATXN3P54252 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATXN3P54252 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 CICP6-201ENST00000457191 2729 ntBASIC17.28■□□□□ 0.36
ATXN3P54252 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.28■□□□□ 0.36
ATXN3P54252 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.28■□□□□ 0.36
ATXN3P54252 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATXN3P54252 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATXN3P54252 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 BCAR1-209ENST00000546196 1340 ntBASIC17.27■□□□□ 0.36
ATXN3P54252 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.27■□□□□ 0.36
ATXN3P54252 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.27■□□□□ 0.36
ATXN3P54252 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.27■□□□□ 0.36
ATXN3P54252 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms