Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TUBB8P12-201ENST00000308911 1335 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 TUBB7P-202ENST00000428444 1305 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 TUBB8P7-204ENST00000567960 1332 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC1A3P43003 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC1A3P43003 AL450487.1-201ENST00000426799 995 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC1A3P43003 DUSP5P1-201ENST00000441325 1139 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC1A3P43003 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC1A3P43003 AC021087.4-201ENST00000563761 564 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC1A3P43003 AC025062.2-201ENST00000605477 670 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 AC004706.3-202ENST00000621574 984 ntBASIC15.55■□□□□ 0.08
SLC1A3P43003 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC1A3P43003 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A3P43003 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC1A3P43003 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC1A3P43003 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC1A3P43003 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC1A3P43003 PCDHA1-201ENST00000378133 2726 ntBASIC15.54■□□□□ 0.08
SLC1A3P43003 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC1A3P43003 AL391005.1-201ENST00000623953 2435 ntBASIC15.54■□□□□ 0.08
SLC1A3P43003 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
SLC1A3P43003 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A3P43003 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A3P43003 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 AC079328.2-201ENST00000561241 3354 ntBASIC15.53■□□□□ 0.08
SLC1A3P43003 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.53■□□□□ 0.08
SLC1A3P43003 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 PCDHB17P-201ENST00000539533 2393 ntBASIC15.53■□□□□ 0.08
SLC1A3P43003 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC1A3P43003 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 LAGE3P1-201ENST00000425356 484 ntBASIC15.53■□□□□ 0.08
SLC1A3P43003 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC1A3P43003 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.53■□□□□ 0.08
SLC1A3P43003 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.53■□□□□ 0.08
SLC1A3P43003 TERC-201ENST00000602385 541 ntBASIC15.53■□□□□ 0.08
SLC1A3P43003 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A3P43003 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A3P43003 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.53■□□□□ 0.08
SLC1A3P43003 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A3P43003 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms