Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.65■□□□□ 0.58
HTTP42858 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.65■□□□□ 0.58
HTTP42858 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTTP42858 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.65■□□□□ 0.58
HTTP42858 AL391069.4-201ENST00000609583 481 ntBASIC18.65■□□□□ 0.58
HTTP42858 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.65■□□□□ 0.58
HTTP42858 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.65■□□□□ 0.58
HTTP42858 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTTP42858 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
HTTP42858 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTTP42858 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTTP42858 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.64■□□□□ 0.57
HTTP42858 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.64■□□□□ 0.57
HTTP42858 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.64■□□□□ 0.57
HTTP42858 MIR5189-201ENST00000577370 114 ntBASIC18.64■□□□□ 0.57
HTTP42858 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 AL033527.5-201ENST00000641382 801 ntBASIC18.64■□□□□ 0.57
HTTP42858 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.64■□□□□ 0.57
HTTP42858 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.64■□□□□ 0.57
HTTP42858 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.64■□□□□ 0.57
HTTP42858 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.64■□□□□ 0.57
HTTP42858 AC007551.1-201ENST00000457394 519 ntBASIC18.64■□□□□ 0.57
HTTP42858 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.64■□□□□ 0.57
HTTP42858 CYP2A7P1-201ENST00000595391 815 ntBASIC18.64■□□□□ 0.57
HTTP42858 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.64■□□□□ 0.57
HTTP42858 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.64■□□□□ 0.57
HTTP42858 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.64■□□□□ 0.57
HTTP42858 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.64■□□□□ 0.57
HTTP42858 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTTP42858 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.63■□□□□ 0.57
HTTP42858 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 AC138028.4-201ENST00000564984 1845 ntBASIC18.63■□□□□ 0.57
HTTP42858 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.63■□□□□ 0.57
HTTP42858 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.63■□□□□ 0.57
HTTP42858 RPL7P3-201ENST00000441388 714 ntBASIC18.63■□□□□ 0.57
HTTP42858 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.63■□□□□ 0.57
HTTP42858 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 AC105129.2-201ENST00000559536 390 ntBASIC18.63■□□□□ 0.57
HTTP42858 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.63■□□□□ 0.57
HTTP42858 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
HTTP42858 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTTP42858 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
HTTP42858 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.63■□□□□ 0.57
HTTP42858 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.63■□□□□ 0.57
HTTP42858 AL033527.5-202ENST00000641632 1098 ntBASIC18.63■□□□□ 0.57
HTTP42858 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
HTTP42858 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
HTTP42858 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HTTP42858 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.62■□□□□ 0.57
HTTP42858 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.62■□□□□ 0.57
HTTP42858 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 KRT8P12-202ENST00000472924 1397 ntBASIC18.62■□□□□ 0.57
HTTP42858 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTTP42858 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.62■□□□□ 0.57
HTTP42858 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.62■□□□□ 0.57
HTTP42858 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.62■□□□□ 0.57
HTTP42858 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HTTP42858 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.62■□□□□ 0.57
HTTP42858 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms