Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNA3P32297 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 NKAPP1-205ENST00000585790 367 ntBASIC17.82■□□□□ 0.44
CHRNA3P32297 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CHRNA3P32297 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 AL513523.2-202ENST00000427283 2040 ntBASIC17.82■□□□□ 0.44
CHRNA3P32297 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHRNA3P32297 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA3P32297 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 HLA-A-202ENST00000376806 1854 ntBASIC17.82■□□□□ 0.44
CHRNA3P32297 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 TUBB8P12-201ENST00000308911 1335 ntBASIC17.81■□□□□ 0.44
CHRNA3P32297 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 TUBB7P-202ENST00000428444 1305 ntBASIC17.81■□□□□ 0.44
CHRNA3P32297 TUBB8P7-204ENST00000567960 1332 ntBASIC17.81■□□□□ 0.44
CHRNA3P32297 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNA3P32297 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNA3P32297 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.81■□□□□ 0.44
CHRNA3P32297 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA3P32297 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA3P32297 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 LINC02199-201ENST00000506655 2702 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 AC079776.2-201ENST00000641154 1609 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 AC003669.1-201ENST00000334569 611 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 HNRNPDP1-201ENST00000439535 754 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNA3P32297 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 AC073592.5-201ENST00000624854 528 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 AL162727.3-201ENST00000635661 2787 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA3P32297 CICP6-201ENST00000457191 2729 ntBASIC17.8■□□□□ 0.44
CHRNA3P32297 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA3P32297 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA3P32297 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA3P32297 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA3P32297 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA3P32297 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA3P32297 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms