Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MTHFD1P11586 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MTHFD1P11586 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MTHFD1P11586 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MTHFD1P11586 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MTHFD1P11586 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
MTHFD1P11586 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.72■□□□□ 0.27
MTHFD1P11586 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.72■□□□□ 0.27
MTHFD1P11586 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
MTHFD1P11586 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 MRPL20P1-201ENST00000400819 433 ntBASIC16.72■□□□□ 0.27
MTHFD1P11586 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.72■□□□□ 0.27
MTHFD1P11586 MED15P5-201ENST00000423150 992 ntBASIC16.72■□□□□ 0.27
MTHFD1P11586 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.72■□□□□ 0.27
MTHFD1P11586 AL591424.1-201ENST00000442569 1213 ntBASIC16.72■□□□□ 0.27
MTHFD1P11586 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.72■□□□□ 0.27
MTHFD1P11586 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 AC140113.2-201ENST00000604370 208 ntBASIC16.72■□□□□ 0.27
MTHFD1P11586 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.72■□□□□ 0.27
MTHFD1P11586 AC004790.2-201ENST00000623588 572 ntBASIC16.72■□□□□ 0.27
MTHFD1P11586 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MTHFD1P11586 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 AC116353.5-201ENST00000638148 1699 ntBASIC16.72■□□□□ 0.27
MTHFD1P11586 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTHFD1P11586 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
MTHFD1P11586 AC079328.2-201ENST00000561241 3354 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.71■□□□□ 0.27
MTHFD1P11586 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MTHFD1P11586 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MTHFD1P11586 SLC25A1P3-201ENST00000395415 828 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 MIR940-201ENST00000401276 94 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.71■□□□□ 0.27
MTHFD1P11586 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.71■□□□□ 0.27
MTHFD1P11586 PRSS29P-201ENST00000440800 595 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 POLD2P1-201ENST00000511220 997 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 FAM197Y3-203ENST00000618346 717 ntBASIC16.71■□□□□ 0.27
MTHFD1P11586 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
MTHFD1P11586 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MTHFD1P11586 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MTHFD1P11586 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFD1P11586 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.71■□□□□ 0.27
MTHFD1P11586 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MTHFD1P11586 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MTHFD1P11586 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
MTHFD1P11586 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.71■□□□□ 0.26
MTHFD1P11586 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
MTHFD1P11586 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
MTHFD1P11586 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
MTHFD1P11586 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
MTHFD1P11586 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 AC093525.9-201ENST00000624961 1746 ntBASIC16.7■□□□□ 0.26
MTHFD1P11586 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFD1P11586 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFD1P11586 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFD1P11586 AC008741.2-201ENST00000612792 3115 ntBASIC16.7■□□□□ 0.26
MTHFD1P11586 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
MTHFD1P11586 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MTHFD1P11586 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 EGFEM1P-202ENST00000431685 1563 ntBASIC16.7■□□□□ 0.26
MTHFD1P11586 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFD1P11586 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms