Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNB1P11230 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNB1P11230 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNB1P11230 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNB1P11230 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNB1P11230 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNB1P11230 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNB1P11230 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNB1P11230 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNB1P11230 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNB1P11230 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNB1P11230 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNB1P11230 COX5BP8-201ENST00000416911 349 ntBASIC17.03■□□□□ 0.32
CHRNB1P11230 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNB1P11230 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNB1P11230 RN7SL692P-201ENST00000464677 288 ntBASIC17.03■□□□□ 0.32
CHRNB1P11230 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.03■□□□□ 0.32
CHRNB1P11230 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNB1P11230 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNB1P11230 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNB1P11230 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNB1P11230 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CHRNB1P11230 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNB1P11230 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNB1P11230 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHRNB1P11230 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNB1P11230 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHRNB1P11230 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRNB1P11230 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNB1P11230 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHRNB1P11230 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRNB1P11230 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRNB1P11230 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNB1P11230 AC142381.1-201ENST00000426099 345 ntBASIC17.02■□□□□ 0.32
CHRNB1P11230 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNB1P11230 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNB1P11230 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 RARRES2P9-201ENST00000565168 469 ntBASIC17.02■□□□□ 0.32
CHRNB1P11230 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHRNB1P11230 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNB1P11230 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CHRNB1P11230 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNB1P11230 BICD1-207ENST00000551848 1962 ntBASIC17.02■□□□□ 0.31
CHRNB1P11230 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.02■□□□□ 0.31
CHRNB1P11230 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.02■□□□□ 0.31
CHRNB1P11230 AC022144.1-201ENST00000602255 1580 ntBASIC17.02■□□□□ 0.31
CHRNB1P11230 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNB1P11230 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 AL354751.1-201ENST00000412768 1863 ntBASIC17.01■□□□□ 0.31
CHRNB1P11230 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 HCG11-201ENST00000411553 5696 ntBASIC17.01■□□□□ 0.31
CHRNB1P11230 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNB1P11230 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.01■□□□□ 0.31
CHRNB1P11230 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
CHRNB1P11230 SPDYE12P-201ENST00000618416 771 ntBASIC17.01■□□□□ 0.31
CHRNB1P11230 AP001350.2-201ENST00000625104 1094 ntBASIC17.01■□□□□ 0.31
CHRNB1P11230 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNB1P11230 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHRNB1P11230 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms