Protein–RNA interactions for Protein: P08034

GJB1, Gap junction beta-1 protein, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1P08034 AC087499.5-201ENST00000452760 1342 ntBASIC18.94■□□□□ 0.62
GJB1P08034 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GJB1P08034 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GJB1P08034 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GJB1P08034 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.94■□□□□ 0.62
GJB1P08034 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GJB1P08034 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GJB1P08034 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GJB1P08034 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.93■□□□□ 0.62
GJB1P08034 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.93■□□□□ 0.62
GJB1P08034 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.93■□□□□ 0.62
GJB1P08034 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.93■□□□□ 0.62
GJB1P08034 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GJB1P08034 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GJB1P08034 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.93■□□□□ 0.62
GJB1P08034 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GJB1P08034 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
GJB1P08034 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GJB1P08034 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.92■□□□□ 0.62
GJB1P08034 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.92■□□□□ 0.62
GJB1P08034 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.92■□□□□ 0.62
GJB1P08034 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.92■□□□□ 0.62
GJB1P08034 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.92■□□□□ 0.62
GJB1P08034 AC022210.1-201ENST00000449856 793 ntBASIC18.92■□□□□ 0.62
GJB1P08034 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.92■□□□□ 0.62
GJB1P08034 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
GJB1P08034 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.92■□□□□ 0.62
GJB1P08034 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
GJB1P08034 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GJB1P08034 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 AP3S2-216ENST00000617003 1561 ntBASIC18.91■□□□□ 0.62
GJB1P08034 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GJB1P08034 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 RNU1-129P-201ENST00000384064 167 ntBASIC18.91■□□□□ 0.62
GJB1P08034 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 DFFBP1-201ENST00000433250 979 ntBASIC18.91■□□□□ 0.62
GJB1P08034 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.91■□□□□ 0.62
GJB1P08034 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 AL138918.1-201ENST00000568306 659 ntBASIC18.91■□□□□ 0.62
GJB1P08034 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 MIR3909-201ENST00000579518 119 ntBASIC18.91■□□□□ 0.62
GJB1P08034 U1.21-201ENST00000580816 167 ntBASIC18.91■□□□□ 0.62
GJB1P08034 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.91■□□□□ 0.62
GJB1P08034 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.91■□□□□ 0.62
GJB1P08034 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.91■□□□□ 0.62
GJB1P08034 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.91■□□□□ 0.62
GJB1P08034 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.91■□□□□ 0.62
GJB1P08034 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GJB1P08034 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GJB1P08034 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
GJB1P08034 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms