Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SFTPBP07988 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.74□□□□□ -0.05
SFTPBP07988 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 AL353593.2-201ENST00000602529 1483 ntBASIC14.74□□□□□ -0.05
SFTPBP07988 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
SFTPBP07988 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.74□□□□□ -0.05
SFTPBP07988 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SFTPBP07988 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SFTPBP07988 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.74□□□□□ -0.05
SFTPBP07988 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 FLJ38576-201ENST00000623820 2459 ntBASIC14.73□□□□□ -0.05
SFTPBP07988 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.73□□□□□ -0.05
SFTPBP07988 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SFTPBP07988 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.73□□□□□ -0.05
SFTPBP07988 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 AC009533.2-201ENST00000543664 586 ntBASIC14.73□□□□□ -0.05
SFTPBP07988 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SFTPBP07988 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SFTPBP07988 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.73□□□□□ -0.05
SFTPBP07988 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SFTPBP07988 AL365209.1-201ENST00000624418 6473 ntBASIC14.73□□□□□ -0.05
SFTPBP07988 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SFTPBP07988 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
SFTPBP07988 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.72□□□□□ -0.05
SFTPBP07988 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.72□□□□□ -0.05
SFTPBP07988 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 AC004870.1-201ENST00000315132 882 ntBASIC14.72□□□□□ -0.05
SFTPBP07988 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.72□□□□□ -0.05
SFTPBP07988 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.72□□□□□ -0.05
SFTPBP07988 EMBP1-201ENST00000458200 901 ntBASIC14.72□□□□□ -0.05
SFTPBP07988 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.72□□□□□ -0.05
SFTPBP07988 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.72□□□□□ -0.05
SFTPBP07988 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.72□□□□□ -0.05
SFTPBP07988 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.72□□□□□ -0.05
SFTPBP07988 BNIP3P18-201ENST00000593976 575 ntBASIC14.72□□□□□ -0.05
SFTPBP07988 LINC01711-201ENST00000598340 967 ntBASIC14.72□□□□□ -0.05
SFTPBP07988 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms