Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.92■□□□□ 0.14
CTSBP07858 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.92■□□□□ 0.14
CTSBP07858 AP000344.2-201ENST00000512987 629 ntBASIC15.92■□□□□ 0.14
CTSBP07858 AC109635.5-201ENST00000533593 962 ntBASIC15.92■□□□□ 0.14
CTSBP07858 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CTSBP07858 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 RARRES2P8-201ENST00000566335 367 ntBASIC15.92■□□□□ 0.14
CTSBP07858 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSBP07858 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.92■□□□□ 0.14
CTSBP07858 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.92■□□□□ 0.14
CTSBP07858 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CTSBP07858 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CTSBP07858 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CTSBP07858 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CTSBP07858 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSBP07858 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSBP07858 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSBP07858 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.92■□□□□ 0.14
CTSBP07858 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.92■□□□□ 0.14
CTSBP07858 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.91■□□□□ 0.14
CTSBP07858 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.91■□□□□ 0.14
CTSBP07858 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.91■□□□□ 0.14
CTSBP07858 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CTSBP07858 FAM58DP-201ENST00000428076 619 ntBASIC15.91■□□□□ 0.14
CTSBP07858 SPCS2P4-201ENST00000436160 681 ntBASIC15.91■□□□□ 0.14
CTSBP07858 SPDYE11-202ENST00000450699 704 ntBASIC15.91■□□□□ 0.14
CTSBP07858 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.91■□□□□ 0.14
CTSBP07858 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.91■□□□□ 0.14
CTSBP07858 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.91■□□□□ 0.14
CTSBP07858 AL138918.1-201ENST00000568306 659 ntBASIC15.91■□□□□ 0.14
CTSBP07858 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 SPDYE9P-201ENST00000570642 692 ntBASIC15.91■□□□□ 0.14
CTSBP07858 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.91■□□□□ 0.14
CTSBP07858 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 SPDYE10P-202ENST00000612005 668 ntBASIC15.91■□□□□ 0.14
CTSBP07858 SPDYE8P-202ENST00000612377 668 ntBASIC15.91■□□□□ 0.14
CTSBP07858 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CTSBP07858 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CTSBP07858 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CTSBP07858 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CTSBP07858 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSBP07858 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CTSBP07858 AL603756.1-201ENST00000606511 2163 ntBASIC15.9■□□□□ 0.14
CTSBP07858 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.9■□□□□ 0.14
CTSBP07858 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CTSBP07858 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.9■□□□□ 0.14
CTSBP07858 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.9■□□□□ 0.14
CTSBP07858 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CTSBP07858 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.9■□□□□ 0.14
CTSBP07858 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.9■□□□□ 0.14
CTSBP07858 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSBP07858 AC069335.1-201ENST00000489972 472 ntBASIC15.9■□□□□ 0.14
CTSBP07858 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CTSBP07858 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.9■□□□□ 0.14
CTSBP07858 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.9■□□□□ 0.14
CTSBP07858 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms