Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TPM3P06753 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPM3P06753 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
TPM3P06753 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPM3P06753 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TPM3P06753 AC122714.2-201ENST00000502787 707 ntBASIC18.98■□□□□ 0.63
TPM3P06753 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TPM3P06753 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TPM3P06753 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM3P06753 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM3P06753 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TPM3P06753 ME2P1-201ENST00000426028 1970 ntBASIC18.97■□□□□ 0.63
TPM3P06753 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM3P06753 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM3P06753 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 NORAD-201ENST00000565493 5339 ntBASIC18.97■□□□□ 0.63
TPM3P06753 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 AC005332.3-201ENST00000589904 676 ntBASIC18.97■□□□□ 0.63
TPM3P06753 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 ALOX12P2-203ENST00000570921 1945 ntBASIC18.97■□□□□ 0.63
TPM3P06753 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM3P06753 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPM3P06753 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TPM3P06753 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM3P06753 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM3P06753 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TPM3P06753 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TPM3P06753 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TPM3P06753 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.96■□□□□ 0.63
TPM3P06753 AC145285.6-201ENST00000604632 637 ntBASIC18.96■□□□□ 0.63
TPM3P06753 AL390719.2-201ENST00000606993 987 ntBASIC18.96■□□□□ 0.63
TPM3P06753 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM3P06753 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM3P06753 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM3P06753 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM3P06753 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
TPM3P06753 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM3P06753 GPR89P-201ENST00000407924 1495 ntBASIC18.96■□□□□ 0.63
TPM3P06753 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM3P06753 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TPM3P06753 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms