Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.82■□□□□ 0.12
OPN1SWP03999 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
OPN1SWP03999 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
OPN1SWP03999 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
OPN1SWP03999 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.81■□□□□ 0.12
OPN1SWP03999 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.81■□□□□ 0.12
OPN1SWP03999 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.81■□□□□ 0.12
OPN1SWP03999 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.81■□□□□ 0.12
OPN1SWP03999 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
OPN1SWP03999 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
OPN1SWP03999 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.81■□□□□ 0.12
OPN1SWP03999 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
OPN1SWP03999 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.81■□□□□ 0.12
OPN1SWP03999 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.81■□□□□ 0.12
OPN1SWP03999 PAUPAR-201ENST00000630360 2965 ntBASIC15.81■□□□□ 0.12
OPN1SWP03999 AL162727.3-201ENST00000635661 2787 ntBASIC15.81■□□□□ 0.12
OPN1SWP03999 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
OPN1SWP03999 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 HYMAI-201ENST00000635591 3347 ntBASIC15.81■□□□□ 0.12
OPN1SWP03999 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
OPN1SWP03999 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.8■□□□□ 0.12
OPN1SWP03999 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.8■□□□□ 0.12
OPN1SWP03999 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
OPN1SWP03999 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
OPN1SWP03999 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 IER3-202ENST00000376377 1350 ntBASIC15.8■□□□□ 0.12
OPN1SWP03999 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 AP000867.3-201ENST00000524675 377 ntBASIC15.8■□□□□ 0.12
OPN1SWP03999 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
OPN1SWP03999 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.8■□□□□ 0.12
OPN1SWP03999 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.8■□□□□ 0.12
OPN1SWP03999 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.8■□□□□ 0.12
OPN1SWP03999 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.8■□□□□ 0.12
OPN1SWP03999 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.8■□□□□ 0.12
OPN1SWP03999 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.8■□□□□ 0.12
OPN1SWP03999 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
OPN1SWP03999 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.8■□□□□ 0.12
OPN1SWP03999 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
OPN1SWP03999 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
OPN1SWP03999 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.79■□□□□ 0.12
OPN1SWP03999 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
OPN1SWP03999 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
OPN1SWP03999 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
OPN1SWP03999 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
OPN1SWP03999 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
OPN1SWP03999 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
OPN1SWP03999 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
OPN1SWP03999 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
OPN1SWP03999 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
OPN1SWP03999 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms