Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 BANF1P1-201ENST00000553684 263 ntBASIC20.1■□□□□ 0.81
COL1A1P02452 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 AP001094.4-201ENST00000579008 2176 ntBASIC20.1■□□□□ 0.81
COL1A1P02452 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.1■□□□□ 0.81
COL1A1P02452 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL1A1P02452 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.09■□□□□ 0.81
COL1A1P02452 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.09■□□□□ 0.81
COL1A1P02452 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL1A1P02452 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.09■□□□□ 0.81
COL1A1P02452 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.09■□□□□ 0.81
COL1A1P02452 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
COL1A1P02452 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL1A1P02452 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL1A1P02452 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL1A1P02452 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.09■□□□□ 0.81
COL1A1P02452 AC097493.3-201ENST00000509725 367 ntBASIC20.09■□□□□ 0.81
COL1A1P02452 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.09■□□□□ 0.81
COL1A1P02452 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 SPDYE12P-201ENST00000618416 771 ntBASIC20.09■□□□□ 0.81
COL1A1P02452 AL358472.5-202ENST00000641448 1267 ntBASIC20.09■□□□□ 0.81
COL1A1P02452 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL1A1P02452 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A1P02452 GGT4P-201ENST00000623672 1708 ntBASIC20.09■□□□□ 0.81
COL1A1P02452 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.09■□□□□ 0.81
COL1A1P02452 AL391256.1-201ENST00000443260 1855 ntBASIC20.09■□□□□ 0.81
COL1A1P02452 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.08■□□□□ 0.81
COL1A1P02452 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.08■□□□□ 0.81
COL1A1P02452 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.08■□□□□ 0.81
COL1A1P02452 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 AP3S2-216ENST00000617003 1561 ntBASIC20.08■□□□□ 0.81
COL1A1P02452 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.08■□□□□ 0.81
COL1A1P02452 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.08■□□□□ 0.81
COL1A1P02452 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL1A1P02452 GK-202ENST00000378941 458 ntTSL 3 BASIC20.08■□□□□ 0.81
COL1A1P02452 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.08■□□□□ 0.81
COL1A1P02452 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A1P02452 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.08■□□□□ 0.81
COL1A1P02452 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.08■□□□□ 0.81
COL1A1P02452 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.08■□□□□ 0.81
COL1A1P02452 MIR4453-201ENST00000584019 89 ntBASIC20.08■□□□□ 0.81
COL1A1P02452 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A1P02452 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.08■□□□□ 0.8
COL1A1P02452 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.08■□□□□ 0.8
COL1A1P02452 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A1P02452 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A1P02452 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.08■□□□□ 0.8
COL1A1P02452 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
COL1A1P02452 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.08■□□□□ 0.8
COL1A1P02452 AC005915.1-201ENST00000624912 2018 ntBASIC20.08■□□□□ 0.8
COL1A1P02452 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A1P02452 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A1P02452 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.08■□□□□ 0.8
COL1A1P02452 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
COL1A1P02452 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A1P02452 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL1A1P02452 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A1P02452 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.07■□□□□ 0.8
COL1A1P02452 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.07■□□□□ 0.8
COL1A1P02452 HLA-J-202ENST00000469281 1241 ntBASIC20.07■□□□□ 0.8
COL1A1P02452 AC004890.2-204ENST00000481968 304 ntBASIC20.07■□□□□ 0.8
COL1A1P02452 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A1P02452 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A1P02452 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A1P02452 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.07■□□□□ 0.8
COL1A1P02452 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms