Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
IFNB1P01574 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.52■□□□□ 0.39
IFNB1P01574 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.52■□□□□ 0.39
IFNB1P01574 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFNB1P01574 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFNB1P01574 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFNB1P01574 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.51■□□□□ 0.39
IFNB1P01574 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IFNB1P01574 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.51■□□□□ 0.39
IFNB1P01574 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.51■□□□□ 0.39
IFNB1P01574 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.51■□□□□ 0.39
IFNB1P01574 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.51■□□□□ 0.39
IFNB1P01574 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.51■□□□□ 0.39
IFNB1P01574 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.51■□□□□ 0.39
IFNB1P01574 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IFNB1P01574 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.51■□□□□ 0.39
IFNB1P01574 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.51■□□□□ 0.39
IFNB1P01574 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNB1P01574 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNB1P01574 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 AC079776.2-201ENST00000641154 1609 ntBASIC17.5■□□□□ 0.39
IFNB1P01574 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.5■□□□□ 0.39
IFNB1P01574 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.5■□□□□ 0.39
IFNB1P01574 ATP5G2P1-201ENST00000433580 426 ntBASIC17.5■□□□□ 0.39
IFNB1P01574 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.5■□□□□ 0.39
IFNB1P01574 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.5■□□□□ 0.39
IFNB1P01574 KRT18P35-201ENST00000510488 1269 ntBASIC17.5■□□□□ 0.39
IFNB1P01574 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
IFNB1P01574 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.5■□□□□ 0.39
IFNB1P01574 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.5■□□□□ 0.39
IFNB1P01574 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IFNB1P01574 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
IFNB1P01574 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.5■□□□□ 0.39
IFNB1P01574 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
IFNB1P01574 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IFNB1P01574 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNB1P01574 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.5■□□□□ 0.39
IFNB1P01574 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
IFNB1P01574 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
IFNB1P01574 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.49■□□□□ 0.39
IFNB1P01574 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
IFNB1P01574 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.49■□□□□ 0.39
IFNB1P01574 AC091076.1-201ENST00000610741 619 ntBASIC17.49■□□□□ 0.39
IFNB1P01574 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.49■□□□□ 0.39
IFNB1P01574 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.49■□□□□ 0.39
IFNB1P01574 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
IFNB1P01574 AC073592.4-201ENST00000623827 446 ntBASIC17.49■□□□□ 0.39
IFNB1P01574 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms