Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLPTM1O96005 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1O96005 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1O96005 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1O96005 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16■□□□□ 0.15
CLPTM1O96005 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16■□□□□ 0.15
CLPTM1O96005 AL441883.1-201ENST00000566170 1045 ntBASIC16■□□□□ 0.15
CLPTM1O96005 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16■□□□□ 0.15
CLPTM1O96005 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1O96005 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1O96005 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1O96005 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLPTM1O96005 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1O96005 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1O96005 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1O96005 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 AC093525.9-201ENST00000624961 1746 ntBASIC15.99■□□□□ 0.15
CLPTM1O96005 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.99■□□□□ 0.15
CLPTM1O96005 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.99■□□□□ 0.15
CLPTM1O96005 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.99■□□□□ 0.15
CLPTM1O96005 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 NEK4P2-201ENST00000580004 1012 ntBASIC15.99■□□□□ 0.15
CLPTM1O96005 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CLPTM1O96005 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLPTM1O96005 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1O96005 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.99■□□□□ 0.15
CLPTM1O96005 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
CLPTM1O96005 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 AC126755.1-201ENST00000525846 6405 ntBASIC15.98■□□□□ 0.15
CLPTM1O96005 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.98■□□□□ 0.15
CLPTM1O96005 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLPTM1O96005 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CLPTM1O96005 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CLPTM1O96005 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 RNF152P1-201ENST00000397754 604 ntBASIC15.98■□□□□ 0.15
CLPTM1O96005 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.98■□□□□ 0.15
CLPTM1O96005 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.98■□□□□ 0.15
CLPTM1O96005 GCSHP2-201ENST00000560971 527 ntBASIC15.98■□□□□ 0.15
CLPTM1O96005 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.98■□□□□ 0.15
CLPTM1O96005 AC024243.1-201ENST00000609234 778 ntBASIC15.98■□□□□ 0.15
CLPTM1O96005 AC010331.1-201ENST00000611423 582 ntBASIC15.98■□□□□ 0.15
CLPTM1O96005 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CLPTM1O96005 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CLPTM1O96005 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms