Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 AC079776.2-201ENST00000641154 1609 ntBASIC15.29■□□□□ 0.04
PPP1R3DO95685 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 AP002414.1-201ENST00000391405 1147 ntBASIC15.29■□□□□ 0.04
PPP1R3DO95685 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 MIR5100-201ENST00000579544 119 ntBASIC15.29■□□□□ 0.04
PPP1R3DO95685 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 NPAP1P7-201ENST00000613027 823 ntBASIC15.29■□□□□ 0.04
PPP1R3DO95685 AL391005.1-201ENST00000623953 2435 ntBASIC15.29■□□□□ 0.04
PPP1R3DO95685 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PPP1R3DO95685 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1R3DO95685 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 AC138894.3-201ENST00000603787 634 ntBASIC15.28■□□□□ 0.04
PPP1R3DO95685 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 AC073592.4-201ENST00000623827 446 ntBASIC15.28■□□□□ 0.04
PPP1R3DO95685 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1R3DO95685 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PPP1R3DO95685 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP1R3DO95685 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 BX005266.1-201ENST00000473402 457 ntBASIC15.27■□□□□ 0.04
PPP1R3DO95685 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP1R3DO95685 AL591684.3-201ENST00000605187 298 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms