Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.76■□□□□ 0.59
CLSTN1O94985 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLSTN1O94985 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.76■□□□□ 0.59
CLSTN1O94985 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.76■□□□□ 0.59
CLSTN1O94985 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.75■□□□□ 0.59
CLSTN1O94985 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.75■□□□□ 0.59
CLSTN1O94985 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLSTN1O94985 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.75■□□□□ 0.59
CLSTN1O94985 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CLSTN1O94985 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLSTN1O94985 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 SPDYE21P-201ENST00000413323 827 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.75■□□□□ 0.59
CLSTN1O94985 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.75■□□□□ 0.59
CLSTN1O94985 AC106795.1-205ENST00000512851 1056 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 AF238378.1-201ENST00000526806 358 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.75■□□□□ 0.59
CLSTN1O94985 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 AL355877.3-201ENST00000622820 899 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 AL139288.1-201ENST00000623748 933 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 AP000867.4-201ENST00000641616 219 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.75■□□□□ 0.59
CLSTN1O94985 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.75■□□□□ 0.59
CLSTN1O94985 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLSTN1O94985 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLSTN1O94985 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.74■□□□□ 0.59
CLSTN1O94985 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.74■□□□□ 0.59
CLSTN1O94985 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.74■□□□□ 0.59
CLSTN1O94985 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.74■□□□□ 0.59
CLSTN1O94985 NKAPP1-205ENST00000585790 367 ntBASIC18.74■□□□□ 0.59
CLSTN1O94985 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.74■□□□□ 0.59
CLSTN1O94985 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLSTN1O94985 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CLSTN1O94985 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLSTN1O94985 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.74■□□□□ 0.59
CLSTN1O94985 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.74■□□□□ 0.59
CLSTN1O94985 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.74■□□□□ 0.59
CLSTN1O94985 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLSTN1O94985 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLSTN1O94985 AC097637.2-201ENST00000624096 1997 ntBASIC18.73■□□□□ 0.59
CLSTN1O94985 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLSTN1O94985 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLSTN1O94985 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.73■□□□□ 0.59
CLSTN1O94985 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.73■□□□□ 0.59
CLSTN1O94985 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms