Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 MCCD1P2-201ENST00000423228 335 ntBASIC17.07■□□□□ 0.32
PRAMEF11O60813 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 AC140658.5-201ENST00000438532 169 ntBASIC17.07■□□□□ 0.32
PRAMEF11O60813 HLA-J-202ENST00000469281 1241 ntBASIC17.07■□□□□ 0.32
PRAMEF11O60813 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 AC068137.2-201ENST00000605408 478 ntBASIC17.07■□□□□ 0.32
PRAMEF11O60813 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 AC092919.2-201ENST00000623631 1645 ntBASIC17.07■□□□□ 0.32
PRAMEF11O60813 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 AC006538.1-201ENST00000567905 1585 ntBASIC17.06■□□□□ 0.32
PRAMEF11O60813 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 MIR3909-201ENST00000579518 119 ntBASIC17.06■□□□□ 0.32
PRAMEF11O60813 AL031055.1-201ENST00000606362 631 ntBASIC17.06■□□□□ 0.32
PRAMEF11O60813 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 NKILA-202ENST00000614771 2598 ntBASIC17.06■□□□□ 0.32
PRAMEF11O60813 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 FLJ38576-201ENST00000623820 2459 ntBASIC17.06■□□□□ 0.32
PRAMEF11O60813 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
PRAMEF11O60813 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF11O60813 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 AP002472.1-201ENST00000577490 586 ntBASIC17.05■□□□□ 0.32
PRAMEF11O60813 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
PRAMEF11O60813 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF11O60813 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF11O60813 AL512652.2-201ENST00000625156 1716 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms