Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 MIR326-201ENST00000362220 95 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GFRA3O60609 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 AC114501.1-201ENST00000445949 172 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.19■□□□□ 0.18
GFRA3O60609 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.19■□□□□ 0.18
GFRA3O60609 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.19■□□□□ 0.18
GFRA3O60609 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC16.19■□□□□ 0.18
GFRA3O60609 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.19■□□□□ 0.18
GFRA3O60609 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.19■□□□□ 0.18
GFRA3O60609 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GFRA3O60609 CU634019.7-201ENST00000624153 1185 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 AP003400.6-201ENST00000624698 740 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 FP236241.2-201ENST00000624906 1185 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.19■□□□□ 0.18
GFRA3O60609 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GFRA3O60609 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.18■□□□□ 0.18
GFRA3O60609 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.18■□□□□ 0.18
GFRA3O60609 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GFRA3O60609 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 MIR33B-201ENST00000385104 96 ntBASIC16.18■□□□□ 0.18
GFRA3O60609 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 RN7SL769P-201ENST00000469386 295 ntBASIC16.18■□□□□ 0.18
GFRA3O60609 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 SCARNA20.5-201ENST00000516991 142 ntBASIC16.18■□□□□ 0.18
GFRA3O60609 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.18■□□□□ 0.18
GFRA3O60609 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.18■□□□□ 0.18
GFRA3O60609 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.18■□□□□ 0.18
GFRA3O60609 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GFRA3O60609 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.18■□□□□ 0.18
GFRA3O60609 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GFRA3O60609 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GFRA3O60609 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.17■□□□□ 0.18
GFRA3O60609 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 ANO7L1-203ENST00000602586 1720 ntBASIC16.17■□□□□ 0.18
GFRA3O60609 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GFRA3O60609 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
GFRA3O60609 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.17■□□□□ 0.18
GFRA3O60609 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.17■□□□□ 0.18
GFRA3O60609 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.17■□□□□ 0.18
GFRA3O60609 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
GFRA3O60609 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.17■□□□□ 0.18
GFRA3O60609 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GFRA3O60609 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.17■□□□□ 0.18
GFRA3O60609 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms