Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.13■□□□□ 0.17
LCMT2O60294 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.13■□□□□ 0.17
LCMT2O60294 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.13■□□□□ 0.17
LCMT2O60294 KRT18P3-201ENST00000451602 1288 ntBASIC16.13■□□□□ 0.17
LCMT2O60294 AL513480.1-201ENST00000451731 511 ntBASIC16.13■□□□□ 0.17
LCMT2O60294 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.13■□□□□ 0.17
LCMT2O60294 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.13■□□□□ 0.17
LCMT2O60294 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 AC005412.3-201ENST00000580309 715 ntBASIC16.13■□□□□ 0.17
LCMT2O60294 AC013467.2-201ENST00000605472 835 ntBASIC16.13■□□□□ 0.17
LCMT2O60294 FAM197Y3-203ENST00000618346 717 ntBASIC16.13■□□□□ 0.17
LCMT2O60294 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.13■□□□□ 0.17
LCMT2O60294 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.13■□□□□ 0.17
LCMT2O60294 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.13■□□□□ 0.17
LCMT2O60294 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 AC092171.3-201ENST00000610122 2651 ntBASIC16.12■□□□□ 0.17
LCMT2O60294 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LCMT2O60294 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.12■□□□□ 0.17
LCMT2O60294 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.12■□□□□ 0.17
LCMT2O60294 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 MED15P5-201ENST00000423150 992 ntBASIC16.12■□□□□ 0.17
LCMT2O60294 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.12■□□□□ 0.17
LCMT2O60294 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LCMT2O60294 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.12■□□□□ 0.17
LCMT2O60294 AC091167.2-201ENST00000579581 588 ntBASIC16.12■□□□□ 0.17
LCMT2O60294 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.12■□□□□ 0.17
LCMT2O60294 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.12■□□□□ 0.17
LCMT2O60294 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.12■□□□□ 0.17
LCMT2O60294 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
LCMT2O60294 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LCMT2O60294 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.12■□□□□ 0.17
LCMT2O60294 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 AL671710.1-201ENST00000610245 2349 ntBASIC16.12■□□□□ 0.17
LCMT2O60294 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCMT2O60294 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LCMT2O60294 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LCMT2O60294 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 SNX33P1-201ENST00000592116 1762 ntBASIC16.11■□□□□ 0.17
LCMT2O60294 UBALD1-205ENST00000590891 2641 ntBASIC16.11■□□□□ 0.17
LCMT2O60294 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 AL591424.1-201ENST00000442569 1213 ntBASIC16.11■□□□□ 0.17
LCMT2O60294 AP002490.2-201ENST00000524791 560 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms