Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 Z83851.2-201ENST00000609564 659 ntBASIC20.8■□□□□ 0.92
SMARCA5O60264 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.8■□□□□ 0.92
SMARCA5O60264 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCA5O60264 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMARCA5O60264 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMARCA5O60264 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.79■□□□□ 0.92
SMARCA5O60264 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
SMARCA5O60264 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 VN2R19P-201ENST00000442399 1052 ntBASIC20.79■□□□□ 0.92
SMARCA5O60264 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SMARCA5O60264 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCA5O60264 AC010654.1-201ENST00000615722 808 ntBASIC20.79■□□□□ 0.92
SMARCA5O60264 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.79■□□□□ 0.92
SMARCA5O60264 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.79■□□□□ 0.92
SMARCA5O60264 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCA5O60264 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCA5O60264 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCA5O60264 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 AC131009.4-201ENST00000624048 1740 ntBASIC20.78■□□□□ 0.92
SMARCA5O60264 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCA5O60264 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SMARCA5O60264 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCA5O60264 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
SMARCA5O60264 AC007967.2-201ENST00000432613 625 ntBASIC20.78■□□□□ 0.92
SMARCA5O60264 KRT18P2-201ENST00000447938 1258 ntBASIC20.78■□□□□ 0.92
SMARCA5O60264 HCG4B-203ENST00000450128 991 ntBASIC20.78■□□□□ 0.92
SMARCA5O60264 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCA5O60264 AC013467.2-201ENST00000605472 835 ntBASIC20.78■□□□□ 0.92
SMARCA5O60264 AC120114.3-201ENST00000611923 658 ntBASIC20.78■□□□□ 0.92
SMARCA5O60264 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMARCA5O60264 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCA5O60264 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCA5O60264 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCA5O60264 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SMARCA5O60264 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
SMARCA5O60264 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.77■□□□□ 0.92
SMARCA5O60264 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 AC092364.2-201ENST00000596710 2692 ntBASIC20.77■□□□□ 0.92
SMARCA5O60264 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCA5O60264 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCA5O60264 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCA5O60264 FAM185BP-201ENST00000443595 716 ntBASIC20.77■□□□□ 0.92
SMARCA5O60264 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.77■□□□□ 0.92
SMARCA5O60264 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCA5O60264 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCA5O60264 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCA5O60264 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCA5O60264 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCA5O60264 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCA5O60264 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SMARCA5O60264 AC129492.6-201ENST00000611383 1305 ntBASIC20.77■□□□□ 0.91
SMARCA5O60264 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCA5O60264 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.77■□□□□ 0.91
SMARCA5O60264 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms