Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 AP003733.1-201ENST00000491725 852 ntBASIC13.82□□□□□ -0.2
SSSCA1O60232 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.82□□□□□ -0.2
SSSCA1O60232 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.82□□□□□ -0.2
SSSCA1O60232 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SSSCA1O60232 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 AC144831.1-201ENST00000573312 2656 ntBASIC13.82□□□□□ -0.2
SSSCA1O60232 AC092850.2-201ENST00000623821 2697 ntBASIC13.82□□□□□ -0.2
SSSCA1O60232 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 AC007967.3-201ENST00000434308 558 ntBASIC13.81□□□□□ -0.2
SSSCA1O60232 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.81□□□□□ -0.2
SSSCA1O60232 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.81□□□□□ -0.2
SSSCA1O60232 AC010947.1-201ENST00000623454 693 ntBASIC13.81□□□□□ -0.2
SSSCA1O60232 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 ME2P1-201ENST00000426028 1970 ntBASIC13.81□□□□□ -0.2
SSSCA1O60232 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.81□□□□□ -0.2
SSSCA1O60232 AL135999.2-201ENST00000622438 1686 ntBASIC13.81□□□□□ -0.2
SSSCA1O60232 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SSSCA1O60232 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SSSCA1O60232 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSSCA1O60232 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 AC092384.3-202ENST00000564646 2873 ntBASIC13.8□□□□□ -0.2
SSSCA1O60232 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms