Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EXTL3O43909 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.26■□□□□ 0.51
EXTL3O43909 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 AC023274.1-201ENST00000418278 595 ntBASIC18.26■□□□□ 0.51
EXTL3O43909 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.26■□□□□ 0.51
EXTL3O43909 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.26■□□□□ 0.51
EXTL3O43909 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.26■□□□□ 0.51
EXTL3O43909 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.26■□□□□ 0.51
EXTL3O43909 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.26■□□□□ 0.51
EXTL3O43909 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EXTL3O43909 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EXTL3O43909 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EXTL3O43909 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.26■□□□□ 0.51
EXTL3O43909 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.25■□□□□ 0.51
EXTL3O43909 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.25■□□□□ 0.51
EXTL3O43909 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 AL671710.1-201ENST00000610245 2349 ntBASIC18.25■□□□□ 0.51
EXTL3O43909 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 AC074386.1-202ENST00000463561 864 ntBASIC18.25■□□□□ 0.51
EXTL3O43909 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.25■□□□□ 0.51
EXTL3O43909 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
EXTL3O43909 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.25■□□□□ 0.51
EXTL3O43909 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.25■□□□□ 0.51
EXTL3O43909 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.25■□□□□ 0.51
EXTL3O43909 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.25■□□□□ 0.51
EXTL3O43909 AGGF1P2-201ENST00000426656 2106 ntBASIC18.25■□□□□ 0.51
EXTL3O43909 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.25■□□□□ 0.51
EXTL3O43909 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EXTL3O43909 KRT8P39-201ENST00000396270 1433 ntBASIC18.24■□□□□ 0.51
EXTL3O43909 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
EXTL3O43909 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXTL3O43909 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.24■□□□□ 0.51
EXTL3O43909 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EXTL3O43909 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.24■□□□□ 0.51
EXTL3O43909 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.24■□□□□ 0.51
EXTL3O43909 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.24■□□□□ 0.51
EXTL3O43909 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.24■□□□□ 0.51
EXTL3O43909 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.24■□□□□ 0.51
EXTL3O43909 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
EXTL3O43909 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.24■□□□□ 0.51
EXTL3O43909 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 AC002347.1-201ENST00000569543 541 ntBASIC18.24■□□□□ 0.51
EXTL3O43909 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.24■□□□□ 0.51
EXTL3O43909 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXTL3O43909 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.24■□□□□ 0.51
EXTL3O43909 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXTL3O43909 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms