Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL16O15467 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL16O15467 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCL16O15467 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL16O15467 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL16O15467 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL16O15467 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCL16O15467 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL16O15467 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL16O15467 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL16O15467 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL16O15467 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL16O15467 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL16O15467 AC241585.1-201ENST00000433527 519 ntBASIC17.48■□□□□ 0.39
CCL16O15467 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL16O15467 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.48■□□□□ 0.39
CCL16O15467 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL16O15467 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL16O15467 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCL16O15467 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL16O15467 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 AC244107.1-201ENST00000442033 332 ntBASIC17.47■□□□□ 0.39
CCL16O15467 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL16O15467 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL16O15467 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.47■□□□□ 0.39
CCL16O15467 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL16O15467 AC073592.8-201ENST00000624126 511 ntBASIC17.47■□□□□ 0.39
CCL16O15467 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 AC108860.2-201ENST00000562760 2183 ntBASIC17.47■□□□□ 0.39
CCL16O15467 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL16O15467 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL16O15467 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL16O15467 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCL16O15467 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.46■□□□□ 0.39
CCL16O15467 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL16O15467 AC004890.2-204ENST00000481968 304 ntBASIC17.46■□□□□ 0.39
CCL16O15467 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.46■□□□□ 0.39
CCL16O15467 AC012645.4-201ENST00000610691 1061 ntBASIC17.46■□□□□ 0.39
CCL16O15467 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCL16O15467 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 AC018470.1-201ENST00000624790 3129 ntBASIC17.46■□□□□ 0.39
CCL16O15467 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL16O15467 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms